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Mass Spectrometry Microbial ID Patents: Who Leads, Gaps 2026

Mass Spectrometry Microbial ID Patents: Who Leads, Gaps 2026
https://www.patsnap.com/resources/blog/rd-blog/mass-spectrometry-microbial-identification-patent-landscape/ · Patsnap · data cut-off 2026-07-31 · downloaded from the live page
Patent Landscape · In Vitro Diagnostics
Mass Spectrometry Microbial Identification Patents: Filing Trends and Leaders
  • 37.5% concentration. The top 5 assignees hold 325 of 867 records in scope — over a third of the entire field sits with a handful of filers.
  • Filing has cooled from its peak. 2017 was the high point at 70 records; by the last complete year the trend had fallen -57% from 2021's 14 to 2024's 6.
  • Material analysis dominates the claims. G01N appears in 60.0% of all 867 records, more than double the next largest class, C12Q at 26.1%.
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867
Published Records
37%
Top-5 Share of All Records
-57%
Filing Growth 2021→2024
US
Leading Jurisdiction

Filing growth compares 2021 (14 records) with 2024 (6) — a three-year span. 2024 is the most recent year we treat as complete: publication lags filing by roughly 18 months, so 2025 onwards are still filling in and any growth rate that ends there would understate the field. Top-5 share is the combined record count of the five largest assignees divided by all 867 records in scope (CR5), not by the ranked leaders only.

Published byPatsnap Research··7 min readSourced from Patsnap Eureka
Field Overview

What this landscape covers

This dataset tracks 867 patent records filed against a search combining microbial mass spectrometry identification and matrix-assisted laser desorption methods with terms tied to spectra databases, protein fingerprinting, score thresholds and species discrimination. The scope spans 2015 through mid-2026, capturing both the instrumentation side of MALDI-TOF workflows and the downstream informatics that turn a spectrum into a species call.

Filing activity peaked in 2017 and has declined since, though the most recent one to two years are always undercounted because publication lags filing by roughly 18 months. Receiving-office data shows the United States as the largest single office, with Europe and the WIPO PCT route also carrying substantial volume — consistent with a technology that gets filed internationally rather than kept to one jurisdiction.

Filing activity and technology mix, 2015-2026
  1. 1MICROMASS UK LTD181
  2. 2BIOMERIEUX INC40
  3. 3THE CHINESE UNIVERSITY OF HONG KONG36
  4. 4CHILDRENS MEDICAL CENT CORP36
  5. 5AGENA BIOSCIENCE INC32
  6. 6THE GOVERNMENT OF THE UNITED STATES OF AMERICA AS REPRESENTED BY THE SECRETARY DEPARTMENT OF HEALTH & HUMAN SERVICES24
  7. 7WISCONSIN ALUMNI RES FOUND23
  8. 8MARRONE BIO INNOVATIONS INC21
  9. 9TAIGA BIOTECHNOLOGIES INC20
  10. 10F HOFFMANN LA ROCHE & CO AG20
Source: Patsnap Eureka. Assignee ranking and totals. Derived from a Patsnap search on Mass Spectrometry Microbial Identification covering 2015–2026, data cut-off 2026-07-31. Counts reflect published records only and shift as new filings publish.Run this in Eureka MCP

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The Numbers

Filing trend and technology composition

Two views of the same 867 records: how filing volume has moved year over year, and which IPC subclasses carry the claims.

Filing trend, 2017-2026

Volume peaked at 70 records in 2017. By the last complete year, 2021's 14 records had fallen to 2024's 6 — a -57% move over that span. Treat 2025 and 2026 figures as still filling in rather than as evidence of continued decline.

Filing trend, 2017-20260204060807020172018201920202021202220232024202502026Most recent year is partial — publication lag means later filings are not yet visible.

IPC subclass composition

G01N (material analysis and testing) touches 60.0% of all 867 records, the single largest class by a wide margin. C12Q (enzyme/DNA-based measuring and testing) sits at 26.1% and H01J (electron and discharge tubes, the mass spec hardware class) at 22.7%. Because records can carry multiple classes, these shares add to well over 100% and should be read as claim density, not as a pie that sums to whole.

IPC subclass compositionG01N · Material analysis & testing52060.0%C12Q · Measuring & testing involving …22626.1%H01J · Electron & discharge tubes19722.7%C12N · Microorganisms & genetic engin…15017.3%A61K · Medicinal preparations14216.4%C07K · Peptides & proteins12514.4%A61B · Diagnosis & surgery9911.4%G16B · Bioinformatics687.8%Other40046.1%

Shares are the percentage of the 867 records in scope. A patent can carry several IPC classes, so the shares add up to more than 100%.

Source: Patsnap Eureka. Filing trend and technology composition. Derived from a Patsnap search on Mass Spectrometry Microbial Identification covering 2015–2026, data cut-off 2026-07-31. Counts reflect published records only and shift as new filings publish.

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Key Patents

Most-cited records in the corpus

Representative Filing
US6969614B12005-11-29

Methods for the isolation and analysis of cellular protein content

GOVERNMENT OF THE UNITED STATES OF AMERICA AS REPRESENTED BY THE SECRETARY OF THE DEPARTMENT OF HEALTH AND HUMAN SERVICES, THE

Describes devices and methods for protein analysis on laser capture microdissected cells, enabling proteomic comparison between cell populations such as normal versus malignant tissue. Disclosed techniques include immunoassays, gel electrophoresis, Western blotting, LCQ-MS and MALDI/TOF characterization, tying sample preparation directly to the mass spectrometry identification step.Filed by the US Department of Health and Human Services, granted 2005-11-29 as US6969614B1.

US6969614B1 — patent drawing 1US6969614B1 — patent drawing 2
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Highest-citation records in scope
#Publication no.Patent titleCitations
1US20040197325A1Antibodies against GPR64 and uses thereof295
2US6395306B1Bee venom protein and gene encoding same259
3US20080133141A1Weighted Scoring Methods and Use Thereof in Screening209
4US20040077090A1Whole cell engineering by mutagenizing a substantial portion of a starting genome, combining mutations, and o…191
5WO2000049410A2Methods and devices for the isolation and analysis of cellular protein content147
6US10916415B2Liquid trap or separator for electrosurgical applications133
7US7033781B1Whole cell engineering by mutagenizing a substantial portion of a starting genome, combining mutations, and o…120
8WO2009062190A2Hyperphotosynthetic organisms112
9US20100129857A1Methods for the isolation and identification of microorganisms90
10US20090203070A1Hyperphotosynthetic organisms90

Citation counts inside a searched corpus favour older records that have had more time to accumulate citations — read this as a signal of influence on the field, not of current commercial relevance.

Each row carries its publication number; clicking a row searches Eureka by that number.

Source: Patsnap Eureka. Citation counts and representative records. Derived from a Patsnap search on Mass Spectrometry Microbial Identification covering 2015–2026, data cut-off 2026-07-31. Counts reflect published records only and shift as new filings publish.Run this in Eureka MCP
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Insights

What the data tells a research or IP team

Four patterns worth acting on before scoping new work in this space.

Concentration
37.5%
of 867 records held by top 5

Filing is concentrated but not locked up

The top 5 assignees combine for 325 of 867 records, 37.5% of the field. That leaves nearly two-thirds distributed across a long tail of single- and few-filing entrants, meaning the core claim space has anchors but plenty of room outside them.

Top 10 combined reach 433 records, 49.9% of scope.
Momentum
-57%
2021 to 2024 filing change

Volume has thinned since the 2017 peak

From a high of 70 records in 2017, filing fell to 14 in 2021 and 6 in 2024, a -57% move over that three-year span. This does not mean the technology is exhausted; it more often signals that the core instrumentation claims are settled and activity has shifted to narrower informatics and workflow refinements.

2025-2026 figures still filling in due to publication lag.
Technology mix
60.0%
of 867 records touch G01N

Material analysis claims dominate the corpus

G01N appears in 60.0% of all records, well ahead of C12Q (26.1%) and H01J (22.7%). A record claiming novel sample preparation or scoring logic will almost always sit alongside G01N prior art, so differentiation has to be argued at the method-step level, not the class level.

Classes overlap; shares exceed 100% by design.
Geography
265
US-filed records, largest single office

US and Europe carry most of the volume

The United States leads with 265 records, followed by the EPO at 157 and the WIPO PCT route at 122. Australia, Canada and the UK each sit in the 49-59 range, suggesting filers protect the core markets first and use PCT to keep options open elsewhere.

Office counts are not mutually exclusive with family counts.
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Looking for what nobody has claimed yet?

Eureka can read the same corpus for gaps instead of for coverage: under-claimed branches adjacent to mass spectrometry microbial identification, with the prior art for and against each one.

Find the white space →
Source: Patsnap Eureka. Co-assignee relationships and derived observations. Derived from a Patsnap search on Mass Spectrometry Microbial Identification covering 2015–2026, data cut-off 2026-07-31. Counts reflect published records only and shift as new filings publish.Run this in Eureka MCP
Players

Who holds the claim space

The assignee ranking covers 100 companies returned by the data endpoint, counted in records — not an exhaustive registry of every filer, but the full ranked set the dataset provides.

Leader
181
records

A single leader well ahead of the field

The top-ranked assignee holds 181 records, more than five times the fifth-place holder's 32. That gap suggests one filer built an early, broad portfolio around core MALDI identification methods rather than the field converging gradually toward a leader.

Fifth place: 32 records. Tenth place: 20 records.
Mid-field
20
records at rank 10

A steep drop-off after the top ranks

By the tenth-ranked assignee, volume has fallen to 20 records — a fraction of the leader's count. This shape, a dominant leader followed by a fast-thinning mid-field, is typical of technologies where instrumentation IP was filed early and downstream players compete on narrower informatics claims.

Top 10 combined: 433 records, 49.9% of scope.
Collaboration
10
co-assignee pairs identified

Co-filing is limited and concentrated

Only 10 co-assignee pairs appear in the dataset, and the strongest pairing recurs at a meaningfully higher count than the others. This points to a small number of stable institutional partnerships — likely instrument makers paired with diagnostics arms — rather than a broad web of joint filing across the field.

Strongest pair recurs at notably higher frequency than the rest.
🔍
Under-claimed branches worth a closer look
Areas where filing density is thin relative to the core instrumentation and database claims.
Rapid colony preparation protocolsClosely-related species discrimination scoringBioinformatics-driven spectra matching (G16B)Portable/point-of-care MALDI workflowsScore-threshold calibration methods
Rank all filers by momentum →
Recent-year filing momentum by leading assignee
AssigneeRecent yearYoY
Micromass UK Ltd0
bioMérieux Inc0
Children's Medical Center Corp0
The Chinese University of Hong Kong0
Taiga Biotechnologies Inc0
Marrone Bio Innovations Inc0
The Government of the United States of America, as represented by the Secretary, Department of Health & Human Services0
F. Hoffmann-La Roche AG0
Source: Patsnap Eureka. Assignee-level momentum. Derived from a Patsnap search on Mass Spectrometry Microbial Identification covering 2015–2026, data cut-off 2026-07-31. Counts reflect published records only and shift as new filings publish.Run this in Eureka MCP
What's Next

Where to take this analysis

The dataset points to specific next steps depending on whether you are scoping freedom to operate, evaluating an acquisition target, or planning where to file.

Map the leader's full claim set

With one assignee holding 181 records against a fifth-place count of 32, understanding exactly which method steps that portfolio locks up is the first freedom-to-operate question to answer before drafting new claims.

Explore assignee portfolios in Eureka

Test the under-claimed branches

Bioinformatics-driven matching and closely-related species discrimination sit well behind G01N and C12Q in filing density. A first claim drafted around scoring logic or colony preparation speed has more open space to work with.

Run a white space search in Eureka

Watch for the 2025-2026 catch-up

Because publication lags filing by roughly 18 months, the apparent decline after 2021 will partly reverse as 2025 and 2026 records publish. Re-run the trend query in six to twelve months before concluding the field has gone quiet.

Set a monitoring alert in Eureka
Source: Patsnap Eureka. Forward-looking reading of the same dataset. Derived from a Patsnap search on Mass Spectrometry Microbial Identification covering 2015–2026, data cut-off 2026-07-31. Counts reflect published records only and shift as new filings publish.Run this in Eureka MCP
FAQ

Common questions on this landscape

Answers are grounded in the same dataset. Derived from a Patsnap search on Mass Spectrometry Microbial Identification covering 2015–2026, data cut-off 2026-07-31. Counts reflect published records only and shift as new filings publish.Run this in Eureka MCP

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Disclaimer. This page is generated from Patsnap Eureka data drawn from a limited snapshot of global patent and scientific-literature records, and is provided for general information and reference only.

Patent data carries inherent limitations: recent filings (typically the most recent 18–24 months) are under-counted due to standard publication lag; counts may be reported at either a patent-family or a patent-record basis and are not always directly comparable; classification, applicant-name, and citation data may contain errors, duplicates, or omissions; and the underlying search query defines and constrains the scope shown. As a result, the analysis may be incomplete or inaccurate and may not reflect the full technology landscape.

Nothing on this page constitutes an exhaustive prior-art, novelty, freedom-to-operate, or validity search, nor does it constitute legal, financial, investment, or professional advice, and it should not be relied upon as such. Any patent, commercial, or strategic decision should be verified independently and reviewed with qualified patent, legal, and domain professionals. Patsnap makes no warranties, express or implied, as to the accuracy, completeness, or fitness for any particular purpose of the information presented.

Machine translation. Assignee and organisation names originally recorded in Chinese, Japanese or Korean have been rendered into English by an AI translation step so that the tables stay readable. These renderings are best-effort and may not match a company’s registered English name; the original name is what the underlying patent record carries, and it is what any Eureka query launched from this page uses.

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